This Reference Manual applies to: AutoDock Vina This Reference Manual is intended for: User. Includes a summary of usage, configuration file. The AutoDock Vina tool allows running ligand-receptor docking calculations with . Please see the AutoDock Vina manual for a description of the output values. USING AUTODOCK 4 AND VINA WITH AUTODOCKTOOLS: A TUTORIAL. This file will contain docking parameters and instructions for.

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